neuroinformatics platform Search Results


neuroinformatics platform the virtual brain  (The Virtual Brain)
90
The Virtual Brain neuroinformatics platform the virtual brain
Neuroinformatics Platform The Virtual Brain, supplied by The Virtual Brain, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/neuroinformatics+platform/neuroinformatics+platform+the+virtual+brain/pm27477535-37-7-9
Average 90 stars, based on 1 article reviews
neuroinformatics platform the virtual brain - by Bioz Stars, 2026-11
90/100 stars
  Buy from Supplier
neuroinformatics platform  (The Virtual Brain)
90
The Virtual Brain neuroinformatics platform
Neuroinformatics Platform, supplied by The Virtual Brain, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/neuroinformatics+platform/neuroinformatics+platform/pm25592995-32-12-2
Average 90 stars, based on 1 article reviews
neuroinformatics platform - by Bioz Stars, 2026-11
90/100 stars
  Buy from Supplier
camh neuroinformatics platform  (LabKey Corporation)
90
LabKey Corporation camh neuroinformatics platform
Overview of the Center for Addiction and Mental Health <t>(CAMH)</t> <t>Neuroinformatics</t> Platform. Data sources include XNAT (imaging), LabKey (molecular), REDCap (electronic case report forms, eCRFs) and case of electronic medical record (eMR) case of electronic medical record (eMR) datasets (CERNER; electronic health records, eHRs) which are federated into a central DB2 database. Federated datasets are available to compute resources (compute and Hadoop clusters) and easily accessible through dashboards and software notebooks through the Neuroinformatics Portal.
Camh Neuroinformatics Platform, supplied by LabKey Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/neuroinformatics+platform/camh+neuroinformatics+platform/pmc06232622-142-12-30
Average 90 stars, based on 1 article reviews
camh neuroinformatics platform - by Bioz Stars, 2026-11
90/100 stars
  Buy from Supplier

Image Search Results


Overview of the Center for Addiction and Mental Health (CAMH) Neuroinformatics Platform. Data sources include XNAT (imaging), LabKey (molecular), REDCap (electronic case report forms, eCRFs) and case of electronic medical record (eMR) case of electronic medical record (eMR) datasets (CERNER; electronic health records, eHRs) which are federated into a central DB2 database. Federated datasets are available to compute resources (compute and Hadoop clusters) and easily accessible through dashboards and software notebooks through the Neuroinformatics Portal.

Journal: Frontiers in Neuroinformatics

Article Title: The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation

doi: 10.3389/fninf.2018.00077

Figure Lengend Snippet: Overview of the Center for Addiction and Mental Health (CAMH) Neuroinformatics Platform. Data sources include XNAT (imaging), LabKey (molecular), REDCap (electronic case report forms, eCRFs) and case of electronic medical record (eMR) case of electronic medical record (eMR) datasets (CERNER; electronic health records, eHRs) which are federated into a central DB2 database. Federated datasets are available to compute resources (compute and Hadoop clusters) and easily accessible through dashboards and software notebooks through the Neuroinformatics Portal.

Article Snippet: The complex data collected by these studies are well supported by the CAMH Neuroinformatics platform as the system can accommodate the diverse data types and combine records through federation: SPINS (LabKey—274, REDCap—174, XNAT—319), PACt-MD (LabKey—230, REDCap—212, XNAT—217).

Techniques: Imaging, Software

CAMH Neuroinformatics Portal landing page (Left), Dashboard view for multi-modal dataset (Right). The filter function for data query is illustrated for the Dashboard view.

Journal: Frontiers in Neuroinformatics

Article Title: The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation

doi: 10.3389/fninf.2018.00077

Figure Lengend Snippet: CAMH Neuroinformatics Portal landing page (Left), Dashboard view for multi-modal dataset (Right). The filter function for data query is illustrated for the Dashboard view.

Article Snippet: The complex data collected by these studies are well supported by the CAMH Neuroinformatics platform as the system can accommodate the diverse data types and combine records through federation: SPINS (LabKey—274, REDCap—174, XNAT—319), PACt-MD (LabKey—230, REDCap—212, XNAT—217).

Techniques:

High-level schematic overview of data flow from the eMHR system (CERNER) to the Neuroinformatics Platform database: (1) Electronic Medical Health Care Data are collected as part of clinical care and from clinical trials/translational clinical research; (2) Extract Transform and Load (ETL) scripts extract data from the electronic medical health record system to a curated intermediary database; (3) The NI extraction scripts are run, pulling only the agreed upon variables and anonymous Research IDs. These data, including an up-to-date schema are transferred to a secure location; (4) Anonymization scripts (sdcMicro; Templ et al., ) are run to determine whether the new extract fulfills anonymization criteria. If not, data flow ceases and the data are triaged. The extract is revised, until the thresholds are appropriately met; (5) Once the anonymization thresholds are successful, data are transferred to the DB2 database, incorporating updated schemas; (6) Accesses to these data are provided securely to research teams, with prior research ethics approvals only.

Journal: Frontiers in Neuroinformatics

Article Title: The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation

doi: 10.3389/fninf.2018.00077

Figure Lengend Snippet: High-level schematic overview of data flow from the eMHR system (CERNER) to the Neuroinformatics Platform database: (1) Electronic Medical Health Care Data are collected as part of clinical care and from clinical trials/translational clinical research; (2) Extract Transform and Load (ETL) scripts extract data from the electronic medical health record system to a curated intermediary database; (3) The NI extraction scripts are run, pulling only the agreed upon variables and anonymous Research IDs. These data, including an up-to-date schema are transferred to a secure location; (4) Anonymization scripts (sdcMicro; Templ et al., ) are run to determine whether the new extract fulfills anonymization criteria. If not, data flow ceases and the data are triaged. The extract is revised, until the thresholds are appropriately met; (5) Once the anonymization thresholds are successful, data are transferred to the DB2 database, incorporating updated schemas; (6) Accesses to these data are provided securely to research teams, with prior research ethics approvals only.

Article Snippet: The complex data collected by these studies are well supported by the CAMH Neuroinformatics platform as the system can accommodate the diverse data types and combine records through federation: SPINS (LabKey—274, REDCap—174, XNAT—319), PACt-MD (LabKey—230, REDCap—212, XNAT—217).

Techniques: Clinical Proteomics, Extraction

Illustration of the CAMH Compute Cluster architecture.

Journal: Frontiers in Neuroinformatics

Article Title: The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation

doi: 10.3389/fninf.2018.00077

Figure Lengend Snippet: Illustration of the CAMH Compute Cluster architecture.

Article Snippet: The complex data collected by these studies are well supported by the CAMH Neuroinformatics platform as the system can accommodate the diverse data types and combine records through federation: SPINS (LabKey—274, REDCap—174, XNAT—319), PACt-MD (LabKey—230, REDCap—212, XNAT—217).

Techniques:

Overview of the Neuroinformatics Platform architecture that leverages high performance storage system replication and virtual machines, to support high availability, redundancy and robust failover.

Journal: Frontiers in Neuroinformatics

Article Title: The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation

doi: 10.3389/fninf.2018.00077

Figure Lengend Snippet: Overview of the Neuroinformatics Platform architecture that leverages high performance storage system replication and virtual machines, to support high availability, redundancy and robust failover.

Article Snippet: The complex data collected by these studies are well supported by the CAMH Neuroinformatics platform as the system can accommodate the diverse data types and combine records through federation: SPINS (LabKey—274, REDCap—174, XNAT—319), PACt-MD (LabKey—230, REDCap—212, XNAT—217).

Techniques:

Summary table of data currently stored in the Center for Addiction and Mental Health (CAMH) Neuroinformatics platform. (A) Neuroinformatics platform data summaries.

Journal: Frontiers in Neuroinformatics

Article Title: The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation

doi: 10.3389/fninf.2018.00077

Figure Lengend Snippet: Summary table of data currently stored in the Center for Addiction and Mental Health (CAMH) Neuroinformatics platform. (A) Neuroinformatics platform data summaries.

Article Snippet: The complex data collected by these studies are well supported by the CAMH Neuroinformatics platform as the system can accommodate the diverse data types and combine records through federation: SPINS (LabKey—274, REDCap—174, XNAT—319), PACt-MD (LabKey—230, REDCap—212, XNAT—217).

Techniques: Imaging